Bacterial Physiology

2025

Bengtsson, M. M., Helgesen, M., Wang, H., Fredriksen, S., & Norderhaug, K. M. (2025). Sea urchin intestinal bacterial communities depend on seaweed diet and contain nitrogen-fixing symbionts. FEMS Microbiology Ecology, 101(2), fiaf006.

Rummel, P. S., Oyeogbe, A. I., Wang, H., Urich, T., & Wrage-Mönnig, N. (2025). Nitrous oxide fluxes, their sources, and soil microbial communities depend more on carbon availability than long-and short-term phosphorus addition. Biology and Fertility of Soils, 1-16.

Kramer, A., Dahl, M. B., Bengtsson, M. M., Boyce, J. M., Heckmann, M., Meister, M., ... & Seifert, U. (2025). No detrimental effect on the hand microbiome of health care staff by frequent alcohol-based antisepsis. American Journal of Infection Control. 55(4), 426-433.

2024

Gaid, M., Jentzsch, W., Beermann, H., Reinhard, A., Meister, M., Berzhanova, R., ... & Mikolasch, A. (2024). Comparative bioremediation of tetradecane, cyclohexanone and cyclohexane by filamentous fungi from polluted habitats in Kazakhstan. Journal of Fungi, 10(6), 436.

Fiore-Donno, A. M., Freudenthal, J., Dahl, M. B., Rixen, C., Urich, T., & Bonkowski, M. (2024). Biotic interactions explain seasonal dynamics of the alpine soil microbiome. ISME Communications, 4(1).

Liebmann, P., Bárta, J., Vogel, C., Urich, T., Kholodov, A., Varsadiya, M., ... & Guggenberger, G. (2024). Permafrost degradation and its consequences for carbon storage in soils of Interior Alaska. Biogeochemistry167(3), 199-223.
DOI: 10.1007/s10533-024-01132-4

Piecha, M., Kreyling, J., Couwenberg, J., Pester, M., Guenther, A., Henningsen, L., ... & Wang, H. (2024). Plant roots but not hydrology control microbiome composition and methane flux in temperate fen mesocosms. Science of the Total Environment, 173480.

Hahn, V., Zühlke, D., Winter, H., Landskron, A., Bernhardt, J., Sievers, S., ... & Kolb, J. F. (2024). Proteomic profiling of antibiotic‐resistant Escherichia coli GW‐AmxH19 isolated from hospital wastewater treated with physical plasma. Proteomics, 24(19), 2300494.

Yessentayeva, K., Reinhard, A., Berzhanova, R., Mukasheva, T., Urich, T., & Mikolasch, A. (2024). Bacterial crude oil and polyaromatic hydrocarbon degraders from Kazakh oil fields as barley growth support. Applied Microbiology and Biotechnology, 108(1), 189.

Söllinger, A., Ahlers, L. S., Dahl, M. B., Sigurðsson, P., Le Noir de Carlan, C., Bhattarai, B., ... & Tveit, A. T. (2024). Microorganisms in subarctic soils are depleted of ribosomes under short-, medium-, and long-term warming. The ISME Journal, 18(1).
DOI: 10.1038/s41396-023-01441-8

Winter, H., Wagner, R., Ehlbeck, J., Urich, T., & Schnabel, U. (2024). Deep impact: Shifts of native cultivable microbial communities on fresh lettuce after treatment with plasma-treated water. Foods, 13(2), 282.

 

2023

Winter, H., Wagner, R., Yao, Y., Ehlbeck, J., & Schnabel, U. (2023). Influence of plasma-treated air on surface microbial communities on freshly harvested lettuce. Current research in food science, 7, 100649.

Dahl, M. B., Kreyling, J., Petters, S., Wang, H., Mortensen, M. S., Maccario, L., ... & Weigel, R. (2023). Warmer winters result in reshaping of the European beech forest soil microbiome (bacteria, archaea, and fungi)—With potential implications for ecosystem functioning. Environmental Microbiology, 25(6), 1118-1135.
DOI: 10.1111/1462-2920.16264

Dahl, M. B., Söllinger, A., Sigurðsson, P., Janssens, I., Peñuelas, J., Sigurdsson, B. D., ... & Urich, T. (2023). Long-term warming-induced trophic downgrading in the soil microbial food web. Soil Biology and Biochemistry, 181, 109044.
DOI: 10.1016/j.soilbio.2023.109044

Groß, V., Reinhard, A., Petters, S., Pichler, M., & Urich, T. (2023). Adding complexity to soil food webs: Myxobacteria have broad predation spectra with bacteria, yeasts, and filamentous fungi in vitro. European Journal of Soil Biology, 117, 103508.
DOI: 10.1016/j.ejsobi.2023.103508

Gaid, M., Pöpke, D., Reinhard, A., Berzhanova, R., Mukasheva, T., Urich, T., & Mikolasch, A. (2023). Characterization of the mycoremediation of n-alkanes and branched-chain alkanes by filamentous fungi from oil-polluted soil samples in Kazakhstan. Microorganisms, 11(9), 2195.

Meene, A., Gierse, L., Schwaiger, T., Karte, C., Schröder, C., Höper, D., ... & Urich, T. (2023). Archaeome structure and function of the intestinal tract in healthy and H1N1 infected swine. Frontiers in Microbiology, 14, 1250140.
DOI: 10.3389/fmicb.2023.1250140

Wang, H., Jurasinski, G., Täumer, J., Kuß, A. W., Groß, V., Köhn, D., ... & Urich, T. (2023). Linking transcriptional dynamics of peat microbiomes to methane fluxes during a summer drought in two rewetted fens. Environmental Science & Technology, 57(12), 5089-5101.
DOI: 10.1021/acs.est.2c07461

Weil, M., Wang, H., Zak, D., & Urich, T. (2023). Spatial and temporal niche separation of methanomassiliicoccales phylotypes in temperate fens. FEMS Microbiology Ecology, 99(6), fiad049.
DOI: 10.1093/femsec/fiad049

2022

Bhar, A., Gierse, L. C., Meene, A., Wang, H., Karte, C., Schwaiger, T., ... & Kaderali, L. (2022). Application of a maximal-clique based community detection algorithm to gut microbiome data reveals driver microbes during influenza A virus infection. Frontiers in Microbiology, 13, 979320.
DOI: 10.3389/fmicb.2022.979320

Söllinger, A., Séneca, J., Dahl, M. B., Motleleng, L. L., Prommer, J., Verbruggen, E., ... & Tveit, A. T. (2022). Down-regulation of the bacterial protein biosynthesis machinery in response to weeks, years, and decades of soil warming. Science Advances, 8(12), eabm3230.
DOI: 10.1126/sciadv.abm3230

Täumer, J., Marhan, S., Groß, V., Jensen, C., Kuss, A. W., Kolb, S., & Urich, T. (2022). Linking transcriptional dynamics of CH4-cycling grassland soil microbiomes to seasonal gas fluxes. The ISME Journal, 16(7), 1788-1797.
DOI: 10.1038/s41396-022-01220-7

Wang, H., Meister, M., Jensen, C., Kuss, A. W., & Urich, T. (2022). The impact of summer drought on peat soil microbiome structure and function-A multi-proxy comparison. ISME Communications, 2(1), 78.
DOI: 10.1038/s43705-022-00150-7

2021

Petters, S., Groß, V., Söllinger, A., Pichler, M., Reinhard, A., Bengtsson, M. M., & Urich, T. (2021). The soil microbial food web revisited: Predatory myxobacteria as keystone taxa?. The ISME Journal, 15(9), 2665-2675.
DOI: 10.1038/s41396-021-00957-5

Weil, M., Hoff, K. J., Meißner, W., Schäfer, F., Söllinger, A., Wang, H., ... & Urich, T. (2021). Full genome sequence of a Methanomassiliicoccales representative enriched from peat soil. Microbiology Resource Announcements10(48), e00443-21. 
DOI: doi.org/10.1128/MRA.00443-21

Gierse, L. C., Meene, A., Schultz, D., Schwaiger, T., Schröder, C., Mücke, P., ... & Riedel, K. (2021). Influenza A H1N1 induced disturbance of the respiratory and fecal microbiome of german landrace pigs–a multi-omics characterization. Microbiology Spectrum9(2), e00182-21.
DOI: doi.org/10.1128/Spectrum.00182-21

Wang, H., Weil, M., Dumack, K., Zak, D., Münch, D., Günther, A., ... & Urich, T. (2021). Eukaryotic rather than prokaryotic microbiomes change over seasons in rewetted fen peatlands. FEMS Microbiology Ecology97(9), fiab121.
DOI: doi.org/10.1093/femsec/fiab121

Wang, H., Bagnoud, A., Ponce-Toledo, R. I., Kerou, M., Weil, M., Schleper, C., & Urich, T. (2021). Linking 16S rRNA gene classification to amoA gene taxonomy reveals environmental distribution of ammonia-oxidizing archaeal clades in peatland soils. Msystems6(4), 10-1128.
DOI: doi.org/10.1128/mSystems.00546-21

Täumer, J., Kolb, S., Boeddinghaus, R. S., Wang, H., Schöning, I., Schrumpf, M., ... & Marhan, S. (2021). Divergent drivers of the microbial methane sink in temperate forest and grassland soils. Global Change Biology27(4), 929-940.
DOI: 10.1111/gcb.15430

Mikolasch, A., Berzhanova, R., Omirbekova, A., Reinhard, A., Zühlke, D., Meister, M., ... & Schauer, F. (2021). Moniliella spathulata, an oil-degrading yeast, which promotes growth of barley in oil-polluted soil. Applied Microbiology and Biotechnology, 105, 401-415.

 

2020

Gierse, L. C., Meene, A., Schultz, D., Schwaiger, T., Karte, C., Schröder, C., ... & Riedel, K. (2020). A multi-omics protocol for swine feces to elucidate longitudinal dynamics in microbiome structure and function. Microorganisms, 8(12), 1887.
DOI: doi.org/10.3390/microorganisms8121887

Jurasinski, G., Ahmad, S., Anadon-Rosell, A., Berendt, J., Beyer, F., Bill, R., ... & Wrage-Mönnig, N. (2020). From understanding to sustainable use of peatlands: The WETSCAPES approach. Soil Systems4(1), 14.
DOI:10.3390/soilsystems4010014

Weil, M., Wang, H., Bengtsson, M., Köhn, D., Günther, A., Jurasinski, G., ... & Urich, T. (2020). Long-term rewetting of three formerly drained peatlands drives congruent compositional changes in pro-and eukaryotic soil microbiomes through environmental filtering. Microorganisms8(4), 550.
DOI: 10.3390/microorganisms8040550